The agreement was signed without any edits though. The vote wasn't legally binding, and was ignored by the government. On the international stage the result had no impact.
Which is kind of... weird? Netherlands is a functioning democracy, but how good of a democracy is it if the politicians can just shrug off the direct vote of their people?
I have no opinion on the question of the referendum, but the fact that it had no impact whatsoever is a bit unsettling.
Voter turnout was very low, only 19% of the electorate actually voted against the agreement.